Spectral Clarity — Phase III Runtime Guide

📂 File Map#

• manifests/PhaseIII\_UVTHz\_Manifest.yaml → Session manifest for UV/THz runs.
• manifests/Safety\_Protocols.yaml → Validator-grade safety definitions.
• overlays/UV\_Overlay\_Template.json → Overlay template for UV fluorescence.
• overlays/THz\_Overlay\_Template.json → Overlay template for THz hydration/structural maps.
• atlases/PhaseIII\_UVTHz\_Atlas\_Schema.md → Schema for UV/THz atlas storage.
• scrolls/SpectralClarity\_PhaseIII\_Scroll.md → Narrative scroll for Phase III.
• runtime/uv\_strobe\_engine.py → UV strobe runtime scaffold.
• runtime/thz\_strobe\_engine.py → THz strobe runtime scaffold.
• runtime/safety\_monitor.py → Safety monitor scaffold.

⚙️ Workflow Steps#

1. Configure UV diode and THz antenna with manifests.
2. Run uv\_strobe\_engine.py and thz\_strobe\_engine.py for gated captures.
3. Apply safety checks via safety\_monitor.py.
4. Compose overlays using JSON templates.
5. Document findings in SpectralClarity\_PhaseIII\_Scroll.md.

🌀 Validator Practices#

• Always enforce safety protocols before running strobes.
• Document duty cycles, pulse widths, and containment.
• Use atlas schema for reproducibility.
• Render uncertainty masks for low-confidence zones.

🔮 Next Steps#

• Phase IV: X-ray stroboscopy and facility integration.
• Cross-band calibration library for full-spectrum fusion.